%define pkg_name R %define pkg_version 3.6.3 %define pkg_release 1%{?_dist_release} Summary: A language for data analysis and graphics Summary(ja): データ解析・グラフィック化の言語 Name: %{pkg_name} Version: %{pkg_version} Release: %{pkg_release} License: GPLv2 Group: Applications/Edutainment URL: http://www.r-project.org Source0: https://cran.r-project.org/src/base/R-3/%{name}-%{version}.tar.gz Source1: Rprofile.site # Patch0: R-release.diff.gz BuildRoot: %{_tmppath}/%{name}-%{version}-root %if %{?_dist_release} >= "vl7" %ifarch x86_64 BuildRequires: clang %endif %endif BuildRequires: gcc-gfortran libgfortran BuildRequires: texinfo %if %{?_dist_release} == "vl6" BuildRequires: R-pcre-devel BuildRequires: tcl85-devel tk85-devel %endif %if %{?_dist_release} >= "vl7" BuildRequires: pcre2-devel BuildRequires: tcl-devel tk-devel %endif BuildRequires: libpng-devel libjpeg-turbo-devel libtiff-devel BuildRequires: readline-devel ncurses-devel BuildRequires: zlib-devel bzip2-devel xz-devel BuildRequires: libSM-devel libX11-devel libICE-devel libXt-devel libXmu-devel BuildRequires: cairo-devel pango-devel BuildRequires: libicu-devel BuildRequires: curl-devel BuildRequires: blas-devel BuildRequires: texlive-common BuildRequires: texlive-collection-basic BuildRequires: texlive-collection-latexextra BuildRequires: texlive-collection-fontsextra %if %{?_dist_release} == "vl6" BuildRequires: texlive-collection-texinfo %endif %if %{?_dist_release} >= "vl7" BuildRequires: texlive-collection-plaingeneric BuildRequires: texlive-collection-fontsrecommended %endif BuildRequires: java-devel %if %{?_dist_release} >= "vl7" %ifarch x86_64 Requires: clang %endif %endif Requires: gcc-gfortran Requires: libgfortran Requires: libicu %if %{?_dist_release} == "vl6" Requires: tcl85 tk85 Requires: R-pcre %endif %if %{?_dist_release} >= "vl7" Requires: tcl tk Requires: pcre2 Obsoletes: tcl85 tk85 Obsoletes: R-pcre %endif Requires: blas Requires: openblas-Rblas Obsoletes: R-devel < %{version}-%{release} Vendor: Project Vine Distribution: Vine Linux Packager: ara_t %description 'GNU S' - A language and environment for statistical computing and graphics. R is similar to the award-winning S system, which was developed at Bell Laboratories by John Chambers et al. It provides a wide variety of statistical and graphical techniques (linear and nonlinear modelling, statistical tests, time series analysis, classification, clustering, ...). R is designed as a true computer language with control-flow constructions for iteration and alternation, and it allows users to add additional functionality by defining new functions. For computationally intensive tasks, C, C++ and Fortran code can be linked and called at run time. %description -l ja 'GNU S' - 統計解析とグラフィックスのプログラミング言語と環境。 Rは、ベル研究所のJohn Chambersらが開発した輝けるS言語に似ており、 線形・非線型モデル、統計検定、時系列分析、クラスター分析など 幅広い統計解析・視覚化手法を提供する。 Rは、条件分岐や反復計算などの制御構造を持つ正真正銘のコンピュータ言語 として設計されており、ユーザが新たに関数を組み込むことが可能である。 また、計算量が多いときにはC、 C++、Fortranなどのコードとリンクさせて 使用することができる。 %package -n libRmath Summary: standalone math library from the R project Summary(ja): 単独で動作するRプロジェクトの数理ライブラリ Group: System Environment/Libraries %description -n libRmath A standalone library of mathematical and statistical functions derived from the R project. This packages provides the shared libRmath library. %description -l ja -n libRmath 単独で動作するRプロジェクトの数理統計ライブラリで、libRmath.soという 共有ライブラリを提供する。 %package -n libRmath-devel Summary: standalone math library from the R project Summary(ja): libRmathの開発ライブラリ Group: Development/Libraries Requires: libRmath = %{version}-%{release} %description -n libRmath-devel A standalone library of mathematical and statistical functions derived from the R project. This packages provides the header files. %description -l ja -n libRmath-devel libRmathのヘッダファイル（Rmath.h） %package -n libRmath-static Summary: Static R Standalone math library Summary(ja): libRmath の静的ライブラリ Group: Development/Libraries Requires: libRmath-devel = %{version}-%{release} %description -n libRmath-static A standalone library of mathematical and statistical functions derived from the R project. This package provides the static libRmath library. %prep %{__rm} -rf ${RPM_BUILD_ROOT} %setup -q # %patch0 -p1 cat > R.desktop <= "vl7" %ifarch x86_64 export CFLAGS="-O2 -m64 -mtune=generic -fno-strict-aliasing" export CXXFLAGS="-O2 -m64 -mtune=generic -fno-strict-aliasing" %endif %endif # Add PATHS to Renviron for R_LIBS_SITE echo 'R_LIBS_SITE=${R_LIBS_SITE-'"'/usr/local/lib/R/site-library:%{_libdir}/R/site-library:%{_libdir}/R/library'"'}' \ >> etc/Renviron.in %{configure} --enable-R-shlib --with-tcltk \ --with-blas="-lblas" \ %if %{?_dist_release} >= "vl7" %ifarch x86_64 CC=clang CXX=clang++ \ %endif %endif %if %{?_dist_release} == "vl6" --with-tcl-config=%{_libdir}/tclConfig85.sh \ --with-tk-config=%{_libdir}/tkConfig85.sh \ CPPFLAGS="-I%{_libdir}/R/include" \ LDFLAGS="-L%{_libdir}/R/lib" %endif %{__make} %{?_smp_mflags} pushd src/nmath/standalone %{__make} %{?_smp_mflags} popd %{__make} pdf %install %{make_install} %{__make} install-pdf DESTDIR=${RPM_BUILD_ROOT} %{__rm} -f ${RPM_BUILD_ROOT}%{_infodir}/dir %{__rm} -f ${RPM_BUILD_ROOT}%{_infodir}/dir.old # Remove libRblas.so %{__rm} -f ${RPM_BUILD_ROOT}%{_libdir}/R/lib/libRblas.so # Install libRmath files pushd src/nmath/standalone %{make_install} popd %{__mkdir_p} ${RPM_BUILD_ROOT}/etc/ld.so.conf.d echo "%{_libdir}/R/lib" > \ ${RPM_BUILD_ROOT}/etc/ld.so.conf.d/%{name}-%{_arch}.conf # Fix lication of R_HOME_DIR in shell wrapper %{__sed} -e "s@R_HOME_DIR=.*@R_HOME_DIR=%{_libdir}/R@" bin/R \ > ${RPM_BUILD_ROOT}%{_libdir}/R/bin/R %{__chmod} 755 ${RPM_BUILD_ROOT}%{_libdir}/R/bin/R %{__sed} -e "s@R_HOME_DIR=.*@R_HOME_DIR=%{_libdir}/R@" bin/R \ > ${RPM_BUILD_ROOT}%{_bindir}/R %{__chmod} 755 ${RPM_BUILD_ROOT}%{_bindir}/R # add R into menu %{__mkdir_p} ${RPM_BUILD_ROOT}%{_datadir}/applications %{__mkdir_p} ${RPM_BUILD_ROOT}%{_datadir}/icons %{__cp} -a R.desktop ${RPM_BUILD_ROOT}%{_datadir}/applications/ %{__cp} -a doc/html/logo.jpg ${RPM_BUILD_ROOT}%{_datadir}/icons/ # move manuals %{__mkdir_p} ${RPM_BUILD_ROOT}%{_docdir}/%{name}-%{version} %{__cp} -r ${RPM_BUILD_ROOT}%{_libdir}/%{name}/doc/* \ ${RPM_BUILD_ROOT}%{_docdir}/%{name}-%{version}/ # make symlink for libblas.so.3 (No need to use blas-devel) pushd ${RPM_BUILD_ROOT}%{_libdir}/R/lib %{__ln_s} %{_libdir}/libblas.so.3 libblas.so popd # Add folders for R_LIBS_SITE %{__mkdir_p} ${RPM_BUILD_ROOT}%{_libdir}/R/site-library # install Rprofile.site %{__install} %{SOURCE1} ${RPM_BUILD_ROOT}%{_libdir}/R/etc %check %{__make} check %clean %{__rm} -rf ${RPM_BUILD_ROOT} %post %{_syssbindir}/ldconfig %{__mkdir_p} %{_prefix}/local/lib/R/site-library %preun if [ "$1" = "0" ] then %{__rm} -f %{_libdir}/R/lib/libblas*.so.* %{__rm} -f %{_libdir}/R/lib/libopenblas*.so.* fi %postun -p %{_syssbindir}/ldconfig %post -n libRmath -p %{_syssbindir}/ldconfig %postun -n libRmath -p %{_syssbindir}/ldconfig %files %defattr(-, root, root) %{_bindir}/R %{_bindir}/Rscript %{_libdir}/R %{_datadir}/applications/* %{_datadir}/icons/* %{_mandir}/man1/* %{_docdir}/%{name}-%{version} %{_sysconfdir}/ld.so.conf.d/* %files -n libRmath %defattr(-, root, root) %{_libdir}/libRmath.so %files -n libRmath-devel %defattr(-, root, root) %{_libdir}/pkgconfig/*.pc %{_includedir}/Rmath.h %files -n libRmath-static %defattr(-, root, root) %{_libdir}/libRmath.a %changelog * Sun Mar 01 2020 Toshiaki Ara 3.6.3-1 - update to 3.6.3 * Thu Dec 12 2019 Toshiaki Ara 3.6.2-1 - update to 3.6.2 * Sun Oct 13 2019 Toshiaki Ara 3.6.1-4 - rebuild with icu-65 * Sat Oct 05 2019 Toshiaki Ara 3.6.1-3 - rebuild with tcl-8.6/tk-8.6 * Sat Aug 31 2019 Toshiaki Ara 3.6.1-2 - rebuild with readline-8.0 * Sat Jul 06 2019 Toshiaki Ara 3.6.1-1 - update to 3.6.1 * Thu May 09 2019 Toshiaki Ara 3.6.0-2 - drop "-fno-schedule-insns2" option for clang/clang++ in VineSeed (x86_64) * Fri Apr 26 2019 Toshiaki Ara 3.6.0-1 - update to 3.6.0 - build using clang/clang++ for VineSeed (x86_64) - change install path for external library - add PATHS to Renviron for R_LIBS_SITE - set default CRAN mirror * Mon Mar 11 2019 Toshiaki Ara 3.5.3-1 - update to 3.5.3 * Fri Jan 25 2019 Toshiaki Ara 3.5.2-2 - rebuild with gfortran-8.2.0 * Thu Dec 20 2018 Toshiaki Ara 3.5.2-1 - update to 3.5.2 * Mon Jul 02 2018 Toshiaki Ara 3.5.1-1 - update to 3.5.1 * Fri Jun 29 2018 Toshiaki Ara 3.5.0-2 - add Requires: openblas-Rblas - change using system blas * Mon Apr 23 2018 Toshiaki Ara 3.5.0-1 - update to 3.5.0 - drop Patch 1 and 2 * Thu Mar 15 2018 Toshiaki Ara 3.4.4-1 - updated to 3.4.4 - add Obsoletes: tcl85 tk85 R-pcre for VineSeed * Tue Jan 09 2018 Toshiaki Ara 3.4.3-2 - rebuild under icu-60.2 * Thu Nov 30 2017 Toshiaki Ara 3.4.3-1 - Updated to 3.4.3 * Thu Sep 28 2017 Toshiaki Ara 3.4.2-1 - Updated to 3.4.2 - change download URL * Mon Jul 03 2017 Toshiaki Ara 3.4.1-2 - left %%{_libdir}/R/doc * Sat Jul 01 2017 Toshiaki Ara 3.4.1-1 - Updated to 3.4.1 - rebuild under R-pcre (pcre-8.39) for Vine6 - add Requires: gcc-gfortran - change to BuildRequires: texlive-collection-plaingeneric - delete unnecessary descriptions * Tue May 02 2017 Toshiaki Ara 3.4.0-1 - Updated to 3.4.0 - add Patch1 and Patch2 to avoid 'make check' error - add export TZ="Asia/Tokyo" to avoid 'make check' error - delete descrption about info * Tue Apr 11 2017 Toshiaki Ara 3.3.3-1 - Updated to 3.3.3 * Thu Nov 17 2016 Toshiaki Ara 3.3.2-3 - use tcl-8.5/tk-8.5 for Vine6.5 - BuildRequires to tcl85-devel/tk85-devel - Requires to tcl85/tk85 * Tue Nov 15 2016 Toshiaki Ara 3.3.2-2 - merge SPEC file for Vine6 - drop devel package - move PDF manuals to /usr/share/doc/R-%%{version} - revert logo of menu item to logo.jpg * Mon Oct 31 2016 Toshiaki Ara 3.3.2-1 - Updated to 3.3.2 * Wed Jun 22 2016 Toshiaki Ara 3.3.1-1vl7 - Updated to 3.3.1 - delete BuildRequires: texlive-collection-lang* * Sat May 14 2016 Toshiaki Ara 3.3.0-2vl7 - add BuildRequires: texlive-collection-lang* * Tue May 03 2016 Toshiaki Ara 3.3.0-1vl7 - Updated to 3.3.0 - add BuildRequires: pcre-devel xz-devel - change logo of menu item to Rlogo.svg * Sun Apr 10 2016 Toshiaki Ara 3.2.4-3 - correct SPEC file * Thu Mar 17 2016 Toshiaki Ara 3.2.4-2 - Updated to 3.2.4-revised * Fri Mar 11 2016 Toshiaki Ara 3.2.4-1 - Updated to 3.2.4 - fixed build error in src/extra/xz * Fri Jan 01 2016 Toshiaki Ara 3.2.3-2 - add BuildRequires: curl-devel - add BuildRequires: libgomp * Sun Dec 13 2015 Toshiaki Ara 3.2.3-1 - Updated to 3.2.3 * Mon Nov 09 2015 Yoji TOYODA 3.2.2-2 - rebuild with icu-56.1 * Mon Aug 17 2015 Toshiaki Ara 3.2.2-1 - Updated to 3.2.2 * Wed Jul 15 2015 Toshiaki Ara 3.2.1-2 - add configure options: --with-tcltk - add BuildRequires: tcl-devel tk-devel - add Requires: tcl tk * Fri Jun 19 2015 Toshiaki Ara 3.2.1-1 - Updated to 3.2.1 * Sat Apr 18 2015 Toshiaki Ara 3.2.0-2 - add "LIBS=-lbz2" to configure option * Fri Apr 17 2015 Toshiaki Ara 3.2.0-1 - Updated to 3.2.0 * Fri Mar 13 2015 Toshiaki Ara 3.1.3-1 - Updated to 3.1.3 - added BuildRequires: texlive-collection-fontsextra for Vine6 - changed option "make check-all" to "make check" - to avoid error in checking of mgcv package - changed orders of BuildRequires * Thu Jan 01 2015 Yoji TOYODA 3.1.2-2 - rebuild with icu-54.1 * Sat Nov 01 2014 Toshiaki Ara 3.1.2-1 - Updated to 3.1.2 * Fri Jul 11 2014 Toshiaki Ara 3.1.1-1 - Updated to 3.1.1 - add BuildRequires: java-1.7.0-openjdk-devel for VineSeed * Sat Apr 26 2014 Toshiaki Ara 3.1.0-2 - add patch (2014-04-26) * Fri Apr 11 2014 Toshiaki Ara 3.1.0-1 - Updated to 3.1.0 * Fri Mar 07 2014 Toshiaki Ara 3.0.3-1 - Updated to 3.0.3 * Tue Jan 07 2014 Toshiaki Ara 3.0.2-4 - rebuild current VineSeed - add patch (2014-01-06) * Tue Dec 03 2013 Toshiaki Ara 3.0.2-3 - add Requires: libicu * Mon Sep 30 2013 Toshiaki Ara 3.0.2-2 - combine spec files Vine6 and VineSeed - correct the days of the week in changelog * Fri Sep 27 2013 Toshiaki Ara 3.0.2-1 - delete BuildRequires: texlive-collection-texinfo - add BuildRequires: texlive-collection-plainextra - add BuildRequires: texlive-collection-latexextra - add BuildRequires: texlive-collection-fontsrecommended - for VineSeed * Thu Sep 26 2013 Toshiaki Ara 3.0.2-1 - Updated to 3.0.2 * Fri May 17 2013 Toshiaki Ara 3.0.1-1 - Updated to 3.0.1 - add BuildRequires: java-1.6.0-openjdk-devel * Thu Apr 04 2013 Toshiaki Ara 3.0.0-1 - Updated to 3.0.0 * Mon Mar 04 2013 Toshiaki Ara 2.15.3-1 - Updated to 2.15.3 - use BuildRequires libjpeg-turbo-devel instead of libjpeg-devel - use BuildRequires ncurses-devel instead of libtermcap-devel * Mon Oct 29 2012 Toshiaki Ara 2.15.2-1 - Updated to 2.15.2 * Sat Sep 08 2012 Toshiaki Ara 2.15.1-2 - changed group to Applications/Edutainment - added R to menu * Mon Jun 25 2012 Toshiaki Ara 2.15.1-1 - Updated to 2.15.1 * Sat Mar 31 2012 Toshiaki Ara 2.15.0-1 - Updated to 2.15.0 * Thu Mar 01 2012 Toshiaki Ara 2.14.2-1 - Updated to 2.14.2 * Sat Dec 24 2011 Toshiaki Ara 2.14.1-1 - Updated to 2.14.1 * Tue Nov 01 2011 Toshiaki Ara 2.14.0-1 - Updated to 2.14.0 - add BuildRequires: texlive-collection-fontsextra * Thu Oct 27 2011 Toshiaki Ara 2.13.2-1 - Updated to 2.13.2 - add BuildRequires: texlive-common - use texlive instead of tetex on Vine5 because of failure to create R-exts.pdf - removed --enable-R-shlib option to %%configure on Vine5 because of segmentation fault * Sat Sep 3 2011 Ryoichi INAGAKI 2.13.1-2 - synchronized to VinePlus/5 package * Sat Jul 09 2011 Toshiaki Ara 2.13.1-1vl5 - Updated to 2.13.1 * Wed Apr 14 2011 Toshiaki Ara 2.13.0-1vl5 - Updated to 2.13.0 * Wed Mar 02 2011 Toshiaki Ara 2.12.2-1vl5 - Updated to 2.12.2 * Sun Feb 27 2011 Yoji TOYODA 2.12.1-3 - add BuildRequires: libicu-devel * Fri Feb 25 2011 Ryoichi INAGAKI 2.12.1-2 - synchronized to VinePlus/5 package * Tue Dec 21 2010 Toshiaki Ara 2.12.1-1vl5 - Updated to 2.12.1 - added --enable-R-shlib option to %%configure - added static subpackage - use BR: texlive instead of tetex on VineSeed * Sun Sep 26 2010 Shu KONNO 2.11.0-3 - rebuilt with rpm-4.8.1 for pkg-config * Sat Apr 24 2010 Toshiaki Ara 2.11.0-2vl5 - recompiled because tcl/tk were not linked * Fri Apr 23 2010 Toshiaki Ara 2.11.0-1vl5 - Updated to 2.11.0 - added Requires: libgfortran * Tue Dec 15 2009 Toshiaki Ara 2.10.1-1vl5 - Updated to 2.10.1 * Fri Nov 06 2009 Toshiaki Ara 2.10.0-3vl5 - patched to 2.10.0 * Sat Oct 31 2009 Ryoichi INAGAKI 2.10.0-2 - spec in UTF-8 * Tue Oct 27 2009 Toshiaki Ara 2.10.0-1vl5 - Updated to 2.10.0 * Wed Sep 23 2009 Toshiaki Ara 2.9.2-1vl5 - Updated to 2.9.2 - deleted BuildRequires: lapack-devel blas-devel - rewrote SPEC file * Thu Aug 16 2007 Ryoichi INAGAKI 1:2.5.1-0vl1 - Updated to 2.5.1 - added BuildRequires: gcc-gfortran for VineSeed - added BuildRequires: lapack-devel blas-devel - fixed %preun script * Wed Dec 20 2006 Susumu Tanimura 1:2.4.1-0vl1 - Updated to 2.4.1 - Added INFO option - Exclude Japanese Rprofile.site * Mon Oct 30 2006 Susumu Tanimura - Updated to 2.4.0 * Mon Oct 2 2006 Martyn Plummer 1:2.3.1-2 - Added optimization flags * Tue Jun 6 2006 Susumu Tanimura 1:2.3.1-0vl1 - Packaged for VineLinux3.2 * Tue May 9 2006 Susumu Tanimura 1:2.3.0-0vl2 - Use JAVA_HOME for R_JAVA_LD_LIBRARY_PATH * Mon May 8 2006 Susumu Tanimura 1:2.3.0-0vl1 - Packaged for VineLinux3.2 - Slipped texinfo - Fixed preun error - Preset Japanese fonts * Thu Jan 12 2006 Susumu Tanimura - Packaged for VineLinux3.2 * Tue Jan 3 2006 Martyn Plumer 1:2.2.1-1 - Restored CAPABILITIES file lost in 2.2.1beta * Mon Dec 12 2005 Martyn Plummer 1:2.2.1beta-1 - Configure uses --without-blas by default. - Install pdf manuals. - All toplevel documentation files are installed into _libdir/R as they may be required by R (qv note on AUTHORS and THANKS below). - Legacy scripts for rebuilding package indices removed. * Mon Sep 19 2005 Martyn Plummer 1:2.2.0-0 - R now compiles with gcc 4.0.1 and default rpm optimization flags. * Wed Jul 13 2005 Martyn Plummer 1:2.1.1-2 - The files AUTHORS and THANKS need to be installed into _libdir/R as they are required by the function contributors(). Previously they were installed only as documentation files. * Tue Jun 21 2005 Martyn Plummer - Corrected date error in SPEC file. * Sun Jun 19 2005 Martyn Plummer - Dropped support for Red Hat boxed set. - Synchronized with Fedora Extras 4 RPM by Tom Calloway including support for shared R library. - Added gfortran support. However, gcc 4.0.0 will not compile R correctly with the default optimization flags, so there is a temporary work-around. * Wed Jun 15 2005 Gernot Stocker - Adaptations for CentOS and Rocks-Linux, tested under Release 4.0 * Sat Apr 30 2005 Joseph P. Skudlarek 0:2.1.0-0.fdr.3 - Install R-data.info file as well. - Make info processing conditional on texinfo version, not platform release, so that if a new enough version is installed, we will build and install info. * Mon Apr 18 2005 Martyn Plummer 0:2.1.0-0.fdr.1 - Built R 2.1.0. R now supports internationalization, so the patch to set the locale to "C" is now dropped. - install.packages() exits gracefully with a helpful message if the file INSTALL is not present, so this is now included in the R-devel package. * Mon Mar 14 2005 Martyn Plummer 0:2.0.1-0.fdr.5 - Added support for Scientific Linux (http://www.scientificlinux.org) A distribution based on RHEL. Thanks to Jon Peatfield. * Mon Feb 28 2005 Martyn Plummer 0:2.0.1-0.fdr.4 - Fixed file ownership in R-devel and libRmath packages * Wed Feb 16 2005 Martyn Plummer 0:2.0.1-0.fdr.3 - R-devel package is now a stub package with no files, except a documentation file (RPM won't accept sub-packages with no files). R now conflicts with earlier (i.e 0:2.0.1-0.fdr.2) versions of R-devel. - Created libRmath subpackage with shared library. * Mon Jan 31 2005 Martyn Plummer 0:2.0.1-0.fdr.2 - Created R-devel and libRmath-devel subpackages * Mon Nov 15 2004 Martyn Plummer 0:2.0.1-0.fdr.1 - Built R 2.0.1 * Wed Nov 10 2004 Martyn Plummer 0:2.0.0-0.fdr.3 - Set R_PRINTCMD at configure times so that by default getOption(printcmd) gives "lpr". - Define macro fcx for all Fedora distributions. This replaces Rinfo * Tue Oct 12 2004 Martyn Plummer 0:2.0.0-0.fdr.2 - Info support is now conditional on the macro Rinfo, which is only defined for Fedora 1 and 2. * Thu Oct 7 2004 Martyn Plummer 0:2.0.0-0.fdr.1 - Built R 2.0.0 - There is no longer a BUGS file, so this is not installed as a documentation file.